ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0118700
Analysis Project Name Prefix Chlamydia pecorum L17
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 93457
Completion Status Complete
Completion Date 2016-08-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) CLC NGS Cell v. 7.5.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 3
Contig Count 3
Gene Calling Method (MIGS-32)
Gene Count 985
Estimated Size 1094114
Sequencing Depth (MIGS-31.1) 1800.0x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-04-29
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2690315944
IMG RNA-Seq ID
Genbank
Genbank ID LFRK00000000 (GCA_001625515.1)
Release Date 2016-04-22
NCBI Genbank Version LFRK01
Assembly Accession GCA_001625515.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Chlamydia pecorum strains from pig
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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