ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0116988
Analysis Project Name Prefix Natronorubrum thiooxidans HArc-T
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 89963
Completion Status Complete
IMG Completion Date 2016-06-30
PI Gerard Muyzer
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.6.2
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 62
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4345
Estimated Size 4209793
Sequencing Depth (MIGS-31.1) 358x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-04-18
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2681812919
IMG RNA-Seq ID
Genbank
Genbank ID FTNR00000000 (GCA_900156475.1)
Release Date 2017-04-17
NCBI Genbank Version FTNR01
Assembly Accession GCA_900156475.1
Genbank Release Date 2017-04-17
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of 100 strains of the haloalkaliphilic chemolithoautotrophic sulfur-oxidizing bacterium Thioalkalivibrio
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1104261 (Portal)
ITS Analysis Project Name Natronorubrum thiooxidans HArc-T
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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