ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0115603
Analysis Project Name Prefix Pseudomonas corrugata RM1-1-4
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 83799
Completion Status Complete
Completion Date 2016-04-04
PI Christin Zachow
Description annotation, gene analysis
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Hierarchical Genome Assembly Process (HGAP) algorithm implemented in the PacBio SMRT Analysis software (Pacific Biosciences, Menlo Park, CA, USA)
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 1
Contig Count 1
Gene Calling Method (MIGS-32) BASys, Glimmer
Gene Count 5273
Estimated Size 6124363
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Christin Zachow on 2016-03-28
Last Modified By JGI automated process on 2018-02-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2660238836
IMG RNA-Seq ID
Genbank
Genbank ID CP014262 (GCA_001708425.1)
Assembly Accession GCA_001708425.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Pseudomonas corrugata RM1-1-4
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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