ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0113139
Analysis Project Name Prefix Clostridium sporogenes 87-0535
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 90380
Completion Status Complete
Completion Date 2016-06-30
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 1.0.13; SOAPdenovo v. 2
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 168
Contig Count 202
Gene Calling Method (MIGS-32)
Gene Count 3848
Estimated Size 4003079
Sequencing Depth (MIGS-31.1) 37.0x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-02-19
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2681813212
IMG RNA-Seq ID
Genbank
Genbank ID JZJP00000000 (GCA_000960225.1)
Release Date 2015-08-19
NCBI Genbank Version JZJP01
Assembly Accession GCA_000960225.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequnencing to identify differences between Group I Clostridium botulinum and non-toxic Clostridium sporogenes strains.
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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