ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0112250
Analysis Project Name Prefix Vibrio cholerae YB4G06
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 93625
Completion Status Complete
Completion Date 2016-08-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) CLC Genomics Workbench De Novo Assemblerv. 6.5.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 65
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3717
Estimated Size 4032120
Sequencing Depth (MIGS-31.1) 533.0x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-02-19
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2690316112
IMG RNA-Seq ID
Genbank
Genbank ID LBGH00000000 (GCA_001402255.1)
Release Date 2015-11-10
NCBI Genbank Version LBGH01
Assembly Accession GCA_001402255.1
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio metoecus and Vibrio cholerae strains co-occurring in the environment
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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