ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0112109
Analysis Project Name Prefix Clostridium botulinum CDC28012
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 95513
Completion Status Complete
IMG Completion Date 2016-09-17
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) MIRA v. 3.9.9
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 369
Contig Count 400
Gene Calling Method (MIGS-32)
Gene Count 4119
Estimated Size 3938583
Sequencing Depth (MIGS-31.1) 27.0x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-02-19
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2695420606
IMG RNA-Seq ID
Genbank
Genbank ID JFGN00000000 (GCA_000730875.1)
Release Date 2015-08-07
NCBI Genbank Version JFGN01
Assembly Accession GCA_000730875.1
Genbank Release Date 2015-08-07
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing to distinguish Clostridium botulinum type A(B) strains isolated from the laboratory during outbreak
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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