ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0109252
Analysis Project Name Prefix Streptococcus pneumoniae 16180
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 99007
Completion Status Complete
Completion Date 2016-10-19
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 57
Contig Count 61
Gene Calling Method (MIGS-32)
Gene Count 2049
Estimated Size 2024478
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.12.0
Added By JGI automated process on 2016-02-04
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2700989312
IMG RNA-Seq ID
Genbank
Genbank ID CMTQ00000000 (GCA_001126465.1)
Release Date 2015-08-05
NCBI Genbank Version CMTQ01
Assembly Accession GCA_001126465.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Population structure and diversity in non-encapsulated Streptococcus pneumoniae
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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