ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0109050
Analysis Project Name Prefix Vibrio parahaemolyticus S042
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 82782
Completion Status Complete
Completion Date 2016-03-23
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SOAPdenovo v. 1.06
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 570
Contig Count 735
Gene Calling Method (MIGS-32)
Gene Count 4888
Estimated Size 5035296
Sequencing Depth (MIGS-31.1) 134.9x
Annotation Pipeline IMG Annotation Pipeline v.4.10.0
Added By JGI automated process on 2016-02-04
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2657245522
IMG RNA-Seq ID
Genbank
Genbank ID AWLT00000000 (GCA_000491335.1)
Release Date 2015-08-02
NCBI Genbank Version AWLT01
Assembly Accession GCA_000491335.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio parahaemolyticus strains for population analysis
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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