ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0109045
Analysis Project Name Prefix Vibrio parahaemolyticus S064
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 82061
Completion Status Complete
IMG Completion Date 2016-04-04
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SOAPdenovo v. 1.06
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 515
Contig Count 677
Gene Calling Method (MIGS-32)
Gene Count 4646
Estimated Size 4989171
Sequencing Depth (MIGS-31.1) 78.8x
Annotation Pipeline IMG Annotation Pipeline v.4.10.2
Added By JGI automated process on 2016-02-04
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2660238132
IMG RNA-Seq ID
Genbank
Genbank ID AWLB00000000 (GCA_000490975.1)
Release Date 2015-08-01
NCBI Genbank Version AWLB01
Assembly Accession GCA_000490975.1
Genbank Release Date 2015-08-01
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio parahaemolyticus strains for population analysis
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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