ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0109026
Analysis Project Name Prefix Vibrio parahaemolyticus S088
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 95746
Completion Status Complete
Completion Date 2016-09-17
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SOAPdenovo v. 1.06
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 293
Contig Count 405
Gene Calling Method (MIGS-32)
Gene Count 4686
Estimated Size 5029343
Sequencing Depth (MIGS-31.1) 106.6x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-02-04
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2695420839
IMG RNA-Seq ID
Genbank
Genbank ID AWKG00000000 (GCA_000490555.1)
Release Date 2015-08-01
NCBI Genbank Version AWKG01
Assembly Accession GCA_000490555.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio parahaemolyticus strains for population analysis
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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