ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0106598
Analysis Project Name Prefix Vibrio parahaemolyticus CFSAN007458
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 86613
Completion Status Complete
Completion Date 2016-05-07
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 599
Contig Count 691
Gene Calling Method (MIGS-32)
Gene Count 5662
Estimated Size 4873395
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.10.5
Added By JGI automated process on 2016-02-04
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2667527778
IMG RNA-Seq ID
Genbank
Genbank ID JNUM00000000 (GCA_000707365.1)
Release Date 2015-08-09
NCBI Genbank Version JNUM01
Assembly Accession GCA_000707365.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio parahaemolyticus strains for rapid detection foodborne illness outbreaks
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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