ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0106593
Analysis Project Name Prefix Vibrio parahaemolyticus CFSAN012491
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 86891
Completion Status Complete
Completion Date 2016-05-07
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 324
Contig Count 378
Gene Calling Method (MIGS-32)
Gene Count 5847
Estimated Size 4973439
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.10.5
Added By JGI automated process on 2016-02-04
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2667528055
IMG RNA-Seq ID
Genbank ID
Genbank ID JNUG00000000 (GCA_000707645.1)
Release Date 2015-08-16
NCBI Genbank Version JNUG01
Assembly Accession
Assembly Accession GCA_000707645.1
Assembly Methods
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio parahaemolyticus strains for rapid detection foodborne illness outbreaks
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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