ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0106581
Analysis Project Name Prefix Vibrio parahaemolyticus CFSAN007446
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 81978
Completion Status Complete
IMG Completion Date 2016-04-04
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 117
Contig Count 137
Gene Calling Method (MIGS-32)
Gene Count 5059
Estimated Size 4960475
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.10.2
Added By JGI automated process on 2016-02-04
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2660238049
IMG RNA-Seq ID
Genbank
Genbank ID JNTD00000000 (GCA_000707685.1)
Release Date 2015-08-09
NCBI Genbank Version JNTD01
Assembly Accession GCA_000707685.1
Genbank Release Date 2015-08-09
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio parahaemolyticus strains for rapid detection foodborne illness outbreaks
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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