ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0106579
Analysis Project Name Prefix Vibrio parahaemolyticus CFSAN007444
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 98942
Completion Status Complete
IMG Completion Date 2016-10-19
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 113
Contig Count 135
Gene Calling Method (MIGS-32)
Gene Count 5107
Estimated Size 4937653
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.12.0
Added By JGI automated process on 2016-02-04
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2700989247
IMG RNA-Seq ID
Genbank
Genbank ID JNTB00000000 (GCA_000707065.1)
Release Date 2015-08-09
NCBI Genbank Version JNTB01
Assembly Accession GCA_000707065.1
Genbank Release Date 2015-08-09
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio parahaemolyticus strains for rapid detection foodborne illness outbreaks
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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