ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0105993
Analysis Project Name Prefix Vibrio parahaemolyticus S114
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 81781
Completion Status Complete
Completion Date 2016-04-20
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SOAPdenovo v. 1.06
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 561
Contig Count 698
Gene Calling Method (MIGS-32)
Gene Count 4786
Estimated Size 5145086
Sequencing Depth (MIGS-31.1) 86.4x
Annotation Pipeline IMG Annotation Pipeline v.4.10.2
Added By JGI automated process on 2016-02-04
Last Modified By JGI automated process on 2017-11-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2663762604
IMG RNA-Seq ID
Genbank
Genbank ID AWJL00000000 (GCA_000490155.1)
Release Date 2015-08-01
NCBI Genbank Version AWJL01
Assembly Accession GCA_000490155.1
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Vibrio parahaemolyticus strains for population analysis
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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