ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0100847
Analysis Project Name Prefix Aliiroseovarius crassostreae CV919-312
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 76024
Completion Status Complete
Completion Date 2016-01-05
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) CLC Genomics Workbench v. 8.0.1; SPAdesGenomic Assembler v. 3.1.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 25
Contig Count 27
Gene Calling Method (MIGS-32)
Gene Count 3759
Estimated Size 3723455
Sequencing Depth (MIGS-31.1) 100.0x
Annotation Pipeline
Added By JGI automated process on 2015-11-10
Last Modified By JGI automated process on 2017-11-22
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2645727822
IMG RNA-Seq ID
Genbank ID
Genbank ID CM003503 (GCA_001307765.1)
Release Date 2015-10-26
NCBI Genbank Version CM003503.1
Genbank ID LKBA00000000 (GCA_001307765.1)
Release Date 2015-10-26
NCBI Genbank Version LKBA01
Assembly Accession
Assembly Accession GCA_001307765.1
Assembly Methods
ANALYSIS PROJECT COMPOSITION
Study Aliiroseovarius crassostreae CV919-312 genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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