ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0100778
Analysis Project Name Prefix Candidatus Phytoplasma pruni CX
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 76227
Completion Status Complete
Completion Date 2016-01-05
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.9
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 39
Contig Count 46
Gene Calling Method (MIGS-32)
Gene Count 625
Estimated Size 593673
Sequencing Depth (MIGS-31.1) 65.0x
Annotation Pipeline
Added By JGI automated process on 2015-11-10
Last Modified By JGI automated process on 2017-11-22
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2645728025
IMG RNA-Seq ID
Genbank ID
Genbank ID LHCF00000000 (GCA_001277135.1)
Release Date 2015-11-05
NCBI Genbank Version LHCF01
Assembly Accession
Assembly Accession GCA_001277135.1
Assembly Methods
ANALYSIS PROJECT COMPOSITION
Study Candidatus Phytoplasma pruni CX genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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