ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0099279
Analysis Project Name Prefix Mariprofundus sp. JGI CrystG Aug3-3-H8
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (screened)
IMG Submission ID 94871
Completion Status Incomplete
Completion Date
PI Jill Banfield
Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.8.2
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 48
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 277
Estimated Size 222764
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2015-10-16
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Development of a pipeline for high-throughput recovery of near-complete and complete microbial genomes from complex metagenomic datasets
Number of Studies 1
Number of Biosamples 0
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1087678 (Portal)
ITS Analysis Project Name Mariprofundus sp. bacterium JGI CrystG Aug3-3-H8 Screened
ITS Analysis Product Name Microbial Minimal Draft Single Cell Screened Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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