ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0077627
Analysis Project Name Prefix Lactobacillus plantarum 90sk
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 71660
Completion Status Complete
Completion Date 2015-10-20
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) GS De Novo Assembler v. 2.8
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 47
Contig Count 47
Gene Calling Method (MIGS-32)
Gene Count 3350
Estimated Size 3371458
Sequencing Depth (MIGS-31.1) 25.0x
Annotation Pipeline
Added By JGI automated process on 2015-07-06
Last Modified By JGI automated process on 2017-11-22
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2636415422
IMG RNA-Seq ID
Genbank
Genbank ID JXAX00000000 (GCA_000830535.1)
Release Date 2015-06-02
NCBI Genbank Version JXAX01
Assembly Accession GCA_000830535.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Lactobacillus plantarum strain:90sk Genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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