ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0074944
Analysis Project Name Prefix Sphingobacteriaceae bacterium JGI 017
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (screened)
IMG Submission ID 92381
Completion Status Complete
Completion Date 2016-07-12
PI Jennifer Pett-Ridge
Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.7.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 96
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1625
Estimated Size 1707769
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2015-06-24
Last Modified By JGI automated process on 2017-02-25
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2684623283
IMG RNA-Seq ID
Genbank
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Avena fatua rhizosphere microbial communities from Hopland, California, USA
Number of Studies 1
Number of Biosamples 0
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1069640 (Portal)
ITS Analysis Project Name Sphingobacteriaceae bacterium JGI 017 (Microbial Minimal Draft Single Cell Screened Genome)
ITS Analysis Product Name Microbial Minimal Draft Single Cell Screened Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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