ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0074658
Analysis Project Name Prefix Pseudomonas brenneri DSM 15294
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 73178
Completion Status Complete
Completion Date 2015-11-06
PI Joyce Loper
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) HGAP v. 2.3.0,protocol version=2.3.0 method=RS_HGAP_Assembly.3,smrtpipe.py v1.87.139483,
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 5655
Estimated Size 6032606
Sequencing Depth (MIGS-31.1) 122x
Annotation Pipeline
Added By JGI automated process on 2015-06-24
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2639762518
IMG RNA-Seq ID
Genbank
Genbank ID LT629800 (GCA_900105815.1)
Release Date 2016-10-21
NCBI Genbank Version LT629800.1
Assembly Accession GCA_900105815.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of a diverse group of Pseudomonas species
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1066848 (Portal)
ITS Analysis Project Name Pseudomonas brenneri DSM 15294
ITS Analysis Product Name Microbial Improved Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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