ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0069558
Analysis Project Name Prefix Vibrio parahaemolyticus VPA-67
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 76064
Completion Status Complete
Completion Date 2016-01-05
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) CLC Genomics Workbench v. 6
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 1510
Contig Count 1940
Gene Calling Method (MIGS-32)
Gene Count 7883
Estimated Size 4679746
Sequencing Depth (MIGS-31.1) 30.0x
Annotation Pipeline
Added By JGI automated process on 2015-03-26
Last Modified By JGI automated process on 2018-02-21
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2645727862
IMG RNA-Seq ID
Genbank
Genbank ID JPIP00000000 (GCA_000773455.1)
Release Date 2014-11-07
NCBI Genbank Version JPIP01
Assembly Accession GCA_000773455.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Vibrio parahaemolyticus strain:VPA-67 Genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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