ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0069546
Analysis Project Name Prefix Sphingopyxis sp. LC363
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 70713
Completion Status Complete
Completion Date 2015-09-21
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 2.5.1
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 73
Contig Count 73
Gene Calling Method (MIGS-32)
Gene Count 3983
Estimated Size 4210757
Sequencing Depth (MIGS-31.1) 28.0x
Annotation Pipeline
Added By JGI automated process on 2015-03-26
Last Modified By JGI automated process on 2015-04-08
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2630968789
IMG RNA-Seq ID
Genbank
Genbank ID JNFC00000000 (GCA_000756385.1)
Release Date 2014-12-24
NCBI Genbank Version JNFC01
Assembly Accession GCA_000756385.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Sphingopyxis sp. LC363 Genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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