ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0068452
Analysis Project Name Prefix Pseudooceanicola atlanticus 22II-S11g
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 75980
Completion Status Complete
Completion Date 2016-01-05
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SOAPdenovo v. 1.05
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP No
Scaffold Count 44
Contig Count 47
Gene Calling Method (MIGS-32)
Gene Count 4683
Estimated Size 4935686
Sequencing Depth (MIGS-31.1) 162.0x
Annotation Pipeline
Added By JGI automated process on 2015-03-13
Last Modified By Supratim Mukherjee on 2017-03-02
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2645727778
IMG RNA-Seq ID
Genbank
Genbank ID AQQX00000000 (GCA_000768315.1)
Release Date 2014-10-24
NCBI Genbank Version AQQX01
Assembly Accession GCA_000768315.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Pseudooceanicola atlanticus 22II-S11g Genome Sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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