ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0060225
Analysis Project Name Prefix Nocardiopsis sp. L17-MgMaSL7
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 149202
Completion Status Complete
Completion Date 2017-09-11
PI Laila P. Partida-Martinez
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.10.1
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 34
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 5463
Estimated Size 6191430
Sequencing Depth (MIGS-31.1) 172x
Annotation Pipeline IMG Annotation Pipeline v.4.15.1
Added By JGI automated process on 2014-10-02
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2751185502
IMG RNA-Seq ID
Genbank
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study The Agave Microbiome: Exploring the role of microbial communities in plant adaptations to desert environments
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1052587 (Portal)
ITS Analysis Project Name Nocardiopsis sp. L17-MgMaSL7
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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