ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0039499
Analysis Project Name Prefix Planktothrix prolifica NIVA-CYA 406
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 55958
Completion Status Complete
IMG Completion Date 2015-02-04
PI
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. MapAsmResearch-19-Apr-2010-patch-17-Aug-2010
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 412
Contig Count 486
Gene Calling Method (MIGS-32)
Gene Count 5272
Estimated Size 5630670
Sequencing Depth (MIGS-31.1) 29.0x
Annotation Pipeline
Added By JGI automated process on 2013-10-11
Last Modified By JGI automated process on 2016-09-02
Non-SP-Owner AP No
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2602041638
Genbank Accession
Genbank ID AVFV00000000 (GCA_000464765.1)
Release Date 2014-06-27
NCBI Genbank Version AVFV01
Assembly Accession GCA_000464765.1
Genbank Release Date 2014-06-27
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Planktothrix prolifica NIVA-CYA 406 Genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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