ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0030299
Analysis Project Name Prefix Shigella dysenteriae sv. 1 Sd197
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID
Completion Status Complete
IMG Completion Date 2007-06-28
PI Jin Q
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Phred-Phrap-Consed
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 3
Contig Count
Gene Calling Method (MIGS-32) Glimmer 2.0
Gene Count 4912
Estimated Size 4560911
Sequencing Depth (MIGS-31.1) 8-9x
Annotation Pipeline
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Tatiparthi Reddy on 2016-11-07
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 640427142
IMG RNA-Seq ID
Genbank
Genbank ID CP000640 (GCA_000012005)
Release Date 2014-05-16
Genbank ID CP000034 (GCA_000012005)
Release Date 2014-05-16
Genbank ID CP000035 (GCA_000012005)
Release Date 2014-05-16
Assembly Accession GCA_000012005
Genbank Release Date 2014-05-16
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome dynamics and diversity of Shigella species
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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