ANALYSIS PROJECT INFORMATION | |||||
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GOLD Analysis Project ID
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Ga0029757 |
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Analysis Project Name |
Pseudopedobacter saltans DSM 12145 |
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Analysis Project Name Suffix
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Analysis Project Type
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Genome Analysis (Isolate) |
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IMG Submission ID
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Completion Status |
Complete |
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IMG Completion Date
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2011-03-26 |
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PI | Jonathan Eisen | ||||
Analysis Project Description
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Visibility | Public | ||||
ANALYSIS PROJECT METADATA | |||||
Assembly Method
(MIGS-30)
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Newbler v. 2.3, Velvet v. 0.7.63, Phrap v. 4.24 SPS |
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IMG Decontamination
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No |
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IMG Decontamination Method
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|
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Scaffold Count
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1 |
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Contig Count
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|
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Gene Calling Method
(MIGS-32)
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Prodigal 2.5, GenePRIMP |
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Gene Count |
3921 |
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Estimated Size |
4635236 |
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Sequencing Depth
(MIGS-31.1)
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645x (Illumina), 19.5x (pyrosequence) |
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Genbank Anomalous Assembly |
No |
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Genbank Anomalous Reason |
|
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Annotation Pipeline |
IMG/W 3.4 |
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Added By |
Jonathan Eisen
on 2010-01-02 |
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Last Modified By |
JGI automated process
on 2022-07-01 |
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ORF Comparison Tools
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|
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PROJECT EXTERNAL REFERENCES | |||||
IMG Taxon ID
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649633082 |
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Genbank Accession
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|
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Genbank Release Date |
2014-01-02 |
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ANALYSIS PROJECT COMPOSITION | |||||
Study |
A Genomic Encyclopedia of Bacteria and Archaea (GEBA) |
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Number of Studies
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1 |
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Number of Projects
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1 |
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Number of Related Analysis Projects
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0 |
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JGI INFORMATION | |||||
JGI Data Utilization Status
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Restricted |
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ITS Analysis Project ID
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1377704 (Portal) |
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ITS Analysis Project Name
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Pseudopedobacter saltans DSM 12145 |
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ITS Analysis Product Name
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Microbial Minimal Draft Isolate Genome |
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ITS Version Number |
1 |
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JGI Award DOI
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10.46936/10.25585/60007482 |
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