ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0026901
Analysis Project Name Prefix Caldithrix abyssi LF13, DSM 13497
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 35153
Completion Status Complete
IMG Completion Date 2014-03-23
PI Jonathan Eisen
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.3
IMG Decontamination No
IMG Decontamination Method
GenePRIMP Yes
Scaffold Count 1
Contig Count 3
Gene Calling Method (MIGS-32) Prodigal 1.4, GenePRIMP
Gene Count 3842
Estimated Size 4978541
Sequencing Depth (MIGS-31.1) 30x
Annotation Pipeline
Added By Jonathan Eisen on 2008-01-15
Last Modified By Supratim Mukherjee on 2017-06-12
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2561511127
IMG RNA-Seq ID
Genbank
Genbank ID CM001402 (GCA_000241815.1)
Release Date 2013-05-09
NCBI Genbank Version AGCQ01
Assembly Accession GCA_000241815.1
Genbank Release Date 2013-05-09
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1
Derived Analysis Projects 0

 

 

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