ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0025839
Analysis Project Name Prefix actinobacterium SCGC AAA044-N04
Analysis Project Name Suffix (unscreened)
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 6871
Completion Status Complete
IMG Completion Date 2011-12-31
PI Stefan Bertilsson
Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) ALLPATHS v. R37654
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 23
Contig Count 24
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 1341
Estimated Size 1286658
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Stefan Bertilsson on 2011-11-16
Last Modified By Supratim Mukherjee on 2017-03-01
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2236661005
IMG RNA-Seq ID
Genbank
Genbank ID AQZI00000000 (GCA_000378885.1)
Release Date 2014-06-20
NCBI Genbank Version AQZI01
Assembly Accession GCA_000378885.1
Genbank Release Date 2014-06-20
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome wide diversity and population genetics in uncultured aquatic bacteria: single cell genomics of the freshwater SAR11 group and the ubiquitous Actinobacteria ac1 lineage
Number of Studies 1
Number of Biosamples 0
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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