ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0019558
Analysis Project Name Prefix Methanobrevibacter smithii TS147B
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 23644
Completion Status Complete
IMG Completion Date 2013-11-27
PI Human Gut Community Users
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 0.7.63, Newbler v. 2.3, minimus2
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 40
Contig Count 40
Gene Calling Method (MIGS-32) Glimmer v. 3.02
Gene Count 1962
Estimated Size 1965064
Sequencing Depth (MIGS-31.1) 157x illumina, 41x 454
Annotation Pipeline
Added By Human Gut Community Users on 2010-11-02
Last Modified By JGI automated process on 2017-03-14
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2547132060
IMG RNA-Seq ID
Genbank
Genbank ID AELS00000000 (GCA_000189955)
Release Date 2014-06-13
NCBI Genbank Version AELS01
Assembly Accession GCA_000189955
Genbank Release Date 2014-06-13
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Pan-genome of Methanobrevibacter smithii, in twins
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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