ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0019551
Analysis Project Name Prefix Methanobrevibacter smithii TS145B
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 23637
Completion Status Complete
Completion Date 2013-11-27
PI Human Gut Community Users
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 0.7.63, Newbler v. 2.3
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 54
Contig Count 54
Gene Calling Method (MIGS-32) Glimmer v. 3.02
Gene Count 1931
Estimated Size 1797373
Sequencing Depth (MIGS-31.1) 166x illumina, 9x 454
Annotation Pipeline
Added By Human Gut Community Users on 2010-11-02
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2547132053
IMG RNA-Seq ID
Genbank
Genbank ID AELL00000000 (GCA_000189815)
Release Date 2013-12-06
NCBI Genbank Version AELL01
Assembly Accession GCA_000189815
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Pan-genome of Methanobrevibacter smithii, in twins
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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