ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0013373
Analysis Project Name SUP05 cluster bacterium AB-751_O20AB-905 (unscreened)
Analysis Project Name Stem SUP05 cluster bacterium AB-751_O20AB-905
Analysis Project Name Suffix (unscreened)
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 15479
Completion Status Complete
IMG Completion Date 2013-06-19
PI Steven J. Hallam
Analysis Project Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) IDBA-UD v. 1.1.0, ALLPATHS-LG v. R42328
IMG Decontamination No
IMG Decontamination Method
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 35
Contig Count 35
Gene Calling Method (MIGS-32) Prodigal, Jigsaw pipeline v. 2.1.1 2013-01-17
Gene Count 379
Estimated Size 295881
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline
Added By Jody Wright on 2013-05-29
Last Modified By JGI automated process on 2018-02-13
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2527291654
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Microbial Systems Ecology of Expanding Oxygen Minimum Zones in the Northeast subarctic Pacific Ocean
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1

 

 

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