ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0013117
Analysis Project Name Prefix Shigella flexneri K-304
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 15077
Completion Status Complete
IMG Completion Date 2013-06-10
PI Ionna Pagani
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Celera v. 6.0
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 93
Contig Count 93
Gene Calling Method (MIGS-32)
Gene Count 5434
Estimated Size 4790351
Sequencing Depth (MIGS-31.1) 20x
Annotation Pipeline
Added By Ionna Pagani on 2010-06-10
Last Modified By JGI automated process on 2017-02-24
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2526164621
IMG RNA-Seq ID
Genbank
Genbank ID AFGZ00000000 (GCA_000213755)
Release Date 2012-11-15
NCBI Genbank Version AFGZ01
Assembly Accession GCA_000213755
Genbank Release Date 2012-11-15
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Comparative sequence analysis of Shigella species
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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