ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0008895
Analysis Project Name Prefix Marine eukaryotic communities from CALCOFI LINE 67, Pacific Ocean, that are photosynthetic - Uncultured metagenome D.1R_WS0722
Analysis Project Name Suffix
Analysis Project Type Metagenome - Cell Enrichment
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI Alexandra Worden
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30)
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count
Contig Count
Gene Calling Method (MIGS-32) FragGeneScan version 1.16, prokaryotic GeneMark.hmm version 2.8, Metagene Annotator version 1.0, Prodigal V2.50: November, 2010
Gene Count
Estimated Size
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Alexandra Worden on 2014-04-03
Last Modified By JGI automated process on 2018-08-23
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
IMG RNA-Seq ID
Genbank
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Marine eukaryotic communities from CALCOFI LINE 67, Pacific Ocean, that are photosynthetic
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1040435 (Portal)
ITS Analysis Project Name Uncultured metagenome D.1R_WS0722
ITS Analysis Product Name Amplified, Random, Cell Enrichment
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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