ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0007604
Analysis Project Name Prefix Megasphaera elsdenii YE34
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 51600
Completion Status Complete
Completion Date 2014-10-15
PI William Kelly
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) vpAllpaths v. r46652
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 34
Contig Count
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 2292
Estimated Size 2421909
Sequencing Depth (MIGS-31.1) 526x
Annotation Pipeline
Added By William Kelly on 2014-02-20
Last Modified By JGI automated process on 2017-09-15
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2593339209
IMG RNA-Seq ID
Genbank
Genbank ID FOQP00000000 (GCA_900113775.1)
Release Date 2017-04-05
NCBI Genbank Version FOQP01
Assembly Accession GCA_900113775.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study The Hungate 1000. A catalogue of reference genomes from the rumen microbiome.
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1034299 (Portal)
ITS Analysis Project Name Megasphaera elsdenii YE34
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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