ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0006934
Analysis Project Name Prefix Gammaproteobacteria bacterium SCGC AC-312-G17
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 72628
Completion Status Complete
IMG Completion Date 2015-10-08
PI Ramunas Stepanauskas
PI Name
Analysis Project Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.0.0
IMG Decontamination No
IMG Decontamination Method
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 36
Contig Count
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 895
Estimated Size 848716
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Ramunas Stepanauskas on 2013-11-21
Last Modified By JGI automated process on 2019-05-03
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2634166789
Genbank Accession
Assembly Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Dark ocean microbial single cell genomics
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
ITS Analysis Project ID 1031768 (Portal)
ITS Analysis Project Name Gammaproteobacteria bacterium SCGC AC-312-G17 Unscreened
ITS Analysis Product Name Microbial Minimal Draft Single Cell Unscreened Genome
ITS Version Number 1

 

 

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