ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0005577
Analysis Project Name Prefix Clostridium beijerinckii HUN142
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 34937
Completion Status Complete
IMG Completion Date 2014-03-07
PI William Kelly
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) vpAllpaths v. r46652
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 53
Contig Count 62
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 5589
Estimated Size 6106710
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By William Kelly on 2013-09-06
Last Modified By JGI automated process on 2017-06-04
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2558860979
IMG RNA-Seq ID
Genbank
Genbank ID JHXK00000000 (GCA_000621745.1)
Release Date 2014-06-19
NCBI Genbank Version JHXK01
Assembly Accession GCA_000621745.1
Genbank Release Date 2014-06-19
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study The Hungate 1000. A catalogue of reference genomes from the rumen microbiome.
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1025985 (Portal)
ITS Analysis Project Name Clostridium beijerinckii HUN142
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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