Studies
|
41,354 |
|
Biosamples
|
99,324 |
|
Sequencing Projects
|
338,233 |
|
Analysis Projects
|
275,353 |
| Organisms | 373,402 |
| ANALYSIS PROJECT INFORMATION | |||||||
|---|---|---|---|---|---|---|---|
|
GOLD Analysis Project ID
|
Ga0005365 |
||||||
| Analysis Project Name Prefix |
Maribacter sp. Hel_I _7 |
||||||
|
Analysis Project Name Suffix
|
|
||||||
|
Analysis Project Type
|
Genome Analysis |
||||||
|
IMG Submission ID
|
29862 | ||||||
| Completion Status |
Complete |
||||||
|
IMG Completion Date
|
2014-02-26 |
||||||
| PI | Hanno Teeling | ||||||
|
Description
|
|
||||||
| Visibility | Public | ||||||
| ANALYSIS PROJECT METADATA | |||||||
|
Assembly Method
(MIGS-30)
|
HGAP v. 2.0.1 |
||||||
|
IMG Decontamination
|
No |
||||||
|
IMG Decontamination Method
|
|
||||||
| GenePRIMP |
Yes |
||||||
|
Scaffold Count
|
3 |
||||||
|
Contig Count
|
3 |
||||||
|
Gene Calling Method
(MIGS-32)
|
Prodigal 2.5 |
||||||
| Gene Count |
4226 |
||||||
| Estimated Size |
4775040 |
||||||
|
Sequencing Depth
(MIGS-31.1)
|
|
||||||
| Annotation Pipeline |
|
||||||
| Added By |
Hanno Teeling
on 2013-08-14 |
||||||
| Last Modified By |
JGI automated process
on 2017-06-04 |
||||||
| Non-SP-Owner AP |
No |
||||||
| PROJECT EXTERNAL REFERENCES | |||||||
|
IMG Taxon ID
|
2558309035 |
||||||
| IMG RNA-Seq ID |
|
||||||
|
Genbank Accession
|
|
||||||
| Assembly Accession |
GCA_000688315.1 |
||||||
| Genbank Release Date |
2014-05-05 |
||||||
| SRA Runs |
|
||||||
| ANALYSIS PROJECT COMPOSITION | |||||||
| Study |
A large-scale integrated study on North Sea by COGITO (Coastal Microbe Genomic & Taxonomic Observatory) |
||||||
|
Number of Studies
|
1 |
||||||
|
Number of Projects
|
1 |
||||||
|
Number of Related Analysis Projects
|
0 |
||||||
|
Derived Analysis Projects
|
0 |
||||||
| JGI INFORMATION | |||||||
|
ITS Analysis Project ID
|
1025060 (Portal) |
||||||
|
ITS Analysis Project Name
|
Maribacter sp. Hel_I _7 |
||||||
|
ITS Analysis Product Name
|
Microbial Improved Draft Isolate Genome |
||||||
| ITS NCBI Taxon ID |
|
||||||
| ITS Version Number |
1 |
||||||
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