ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0004562
Analysis Project Name Prefix Pseudomonas plecoglossicida DSM 15088
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 29787
Completion Status Complete
Completion Date 2014-02-12
PI Nikos Kyrpides
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) vpAllpaths v. r46652
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 59
Contig Count 58
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 4976
Estimated Size 5349493
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Nikos Kyrpides on 2013-04-30
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2556921648
IMG RNA-Seq ID
Genbank
Genbank ID JHYX00000000 (GCA_000688275.1)
Release Date 2014-06-18
NCBI Genbank Version JHYX01
Assembly Accession GCA_000688275.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes (KMG-I) project
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1021495 (Portal)
ITS Analysis Project Name Pseudomonas plecoglossicida DSM 15088
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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