ANALYSIS PROJECT INFORMATION | |||||||
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GOLD Analysis Project ID
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Ga0001120 |
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Analysis Project Name Prefix |
Salinispora arenicola CNY282 |
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Analysis Project Name Suffix
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Analysis Project Type
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Genome Analysis |
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IMG Submission ID
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12635 |
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Completion Status |
Complete |
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Completion Date
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2013-02-01 |
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PI | paul r. jensen | ||||||
Description
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Visibility | Public | ||||||
ANALYSIS PROJECT METADATA | |||||||
Assembly Method
(MIGS-30)
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Velvet v. 1.1.04, ALLPATHS v. R41043 |
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IMG Decontamination
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No |
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IMG Decontamination Method
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GenePRIMP |
No |
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Scaffold Count
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67 |
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Contig Count
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74 |
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Gene Calling Method
(MIGS-32)
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Prodigal 2.5 |
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Gene Count |
5236 |
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Estimated Size |
5755139 |
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Sequencing Depth
(MIGS-31.1)
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Annotation Pipeline |
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Added By |
paul r. jensen
on 2012-07-05 |
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Last Modified By |
JGI automated process
on 2017-06-04 |
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Non-SP-Owner AP |
No |
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PROJECT EXTERNAL REFERENCES | |||||||
IMG Taxon ID
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2521172655 |
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IMG RNA-Seq ID |
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Genbank ID
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Assembly Accession |
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Assembly Methods |
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ANALYSIS PROJECT COMPOSITION | |||||||
Study |
Genome sequencing of the marine actinomycete Salinispora pacifica |
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Number of Studies
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1 |
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Number of Projects
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1 |
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Number of Related Analysis Projects
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0 |
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Derived Analysis Projects
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0 |
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JGI INFORMATION | |||||||
ITS Analysis Project ID
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1007313 (Portal) |
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ITS Analysis Project Name
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Salinispora arenicola CNY-282 |
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ITS Analysis Product Name
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Microbial Minimal Draft Isolate Genome |
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ITS NCBI Taxon ID |
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ITS Version Number |
1 |
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