| ANALYSIS PROJECT INFORMATION | |||||||
|---|---|---|---|---|---|---|---|
GOLD Analysis Project ID
|
Ga0001120 |
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| Analysis Project Name Prefix |
Salinispora arenicola CNY282 |
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|
Analysis Project Name Suffix
|
|
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|
Analysis Project Type
|
Genome Analysis |
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|
IMG Submission ID
|
12635 |
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| Completion Status |
Complete |
||||||
|
Completion Date
|
2013-02-01 |
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| PI | paul r. jensen | ||||||
|
Description
|
|
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| Visibility | Public | ||||||
| ANALYSIS PROJECT METADATA | |||||||
|
Assembly Method
(MIGS-30)
|
Velvet v. 1.1.04, ALLPATHS v. R41043 |
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|
IMG Decontamination
|
No |
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|
IMG Decontamination Method
|
|
||||||
| GenePRIMP |
No |
||||||
|
Scaffold Count
|
67 |
||||||
|
Contig Count
|
74 |
||||||
|
Gene Calling Method
(MIGS-32)
|
Prodigal 2.5 |
||||||
| Gene Count |
5236 |
||||||
| Estimated Size |
5755139 |
||||||
|
Sequencing Depth
(MIGS-31.1)
|
|
||||||
| Annotation Pipeline |
|
||||||
| Added By |
paul r. jensen
on 2012-07-05 |
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| Last Modified By |
JGI automated process
on 2017-06-04 |
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| Non-SP-Owner AP |
No |
||||||
| PROJECT EXTERNAL REFERENCES | |||||||
|
IMG Taxon ID
|
2521172655 |
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| IMG RNA-Seq ID |
|
||||||
|
Genbank ID
|
|
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| Assembly Accession |
|
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| Assembly Methods |
|
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| ANALYSIS PROJECT COMPOSITION | |||||||
| Study |
Genome sequencing of the marine actinomycete Salinispora pacifica |
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|
Number of Studies
|
1 |
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|
Number of Projects
|
1 |
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|
Number of Related Analysis Projects
|
0 |
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|
Derived Analysis Projects
|
0 |
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| JGI INFORMATION | |||||||
|
ITS Analysis Project ID
|
1007313 (Portal) |
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|
ITS Analysis Project Name
|
Salinispora arenicola CNY-282 |
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|
ITS Analysis Product Name
|
Microbial Minimal Draft Isolate Genome |
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| ITS NCBI Taxon ID |
|
||||||
| ITS Version Number |
1 |
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