ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0001078
Analysis Project Name Prefix Pseudomonas sp. LAIL14HWK12:I7
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 13686
Completion Status Complete
Completion Date 2013-03-21
PI Jeff Dangl
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Unknown program v. before 2013-03-20
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 28
Contig Count 33
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 5353
Estimated Size 5953767
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Jeff Dangl on 2012-09-25
Last Modified By JGI automated process on 2017-06-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2523231084
IMG RNA-Seq ID
Genbank
Genbank ID AXYZ00000000 (GCA_000483465.1)
Release Date 2014-06-12
NCBI Genbank Version AXYZ01
Assembly Accession GCA_000483465.1
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Plant associated metagenomes--Microbial community diversity and host control of community assembly across model and emerging plant ecological genomics systems.
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1007042 (Portal)
ITS Analysis Project Name Pseudomonas sp. LAIL14HWK12:I7
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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