ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0000345
Analysis Project Name Prefix Methylobacterium sp. 285MFTsu5.1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 12603
Completion Status Complete
IMG Completion Date 2013-02-01
PI Jeff Dangl
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 1.1.04, ALLPATHS v. R42328
IMG Decontamination No
IMG Decontamination Method
GenePRIMP No
Scaffold Count 95
Contig Count 96
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 6392
Estimated Size 6628554
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Jeff Dangl on 2013-01-24
Last Modified By JGI automated process on 2017-06-03
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2521172632
IMG RNA-Seq ID
Genbank
Genbank ID ARTI00000000 (GCA_000383455.1)
Release Date 2014-06-18
NCBI Genbank Version ARTI01
Assembly Accession GCA_000383455.1
Genbank Release Date 2014-06-18
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Plant associated metagenomes--Microbial community diversity and host control of community assembly across model and emerging plant ecological genomics systems.
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1002957 (Portal)
ITS Analysis Project Name Methylobacterium sp. 285MFTsu5.1
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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