ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0604384
Analysis Project Name Escherichia coli S455
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI Unknown
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Shovill v. 1.0.1
IMG Decontamination
IMG Decontamination Method
Scaffold Count
Contig Count 141
Gene Calling Method (MIGS-32)
Gene Count 5020
Estimated Size 5068826
Sequencing Depth (MIGS-31.1) 95x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2023-04-17
Last Modified By
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
Genbank Accession
Genbank ID JAIHIP000000000 (GCA_020669705.1)
Release Date 2022-01-25
NCBI Genbank Version JAIHIP01
Genbank Release Date 2022-01-25
ANALYSIS PROJECT COMPOSITION
Study Epidemiology of Salmonella and E. coli in wildlife and environmental samples from swine farms in Ontario
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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