ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0588681
Analysis Project Name Pectobacterium quasiaquaticum A398-S21-F17
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 288876
Completion Status Complete
IMG Completion Date 2022-12-09
PI Unknown
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Hybrid genome assembly : Unicycler v. 0.4.8
IMG Decontamination
IMG Decontamination Method
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 4146
Estimated Size 4321692
Sequencing Depth (MIGS-31.1) 84x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.1.11
Added By JGI automated process on 2022-11-08
Last Modified By JGI automated process on 2022-12-16
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2987457308
Genbank Accession
Genbank ID CP065178 (GCA_014946825.2)
Release Date 2022-05-28
NCBI Genbank Version CP065178.1
Genbank Release Date 2022-05-28
ANALYSIS PROJECT COMPOSITION
Study Pectobacterium quasiaquaticum strains isolated from fresh water in France. Genome sequencing
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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