ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0567547
Analysis Project Name Metatranscriptome of hydrothermal vent plume microbial communities from Gulf of California, Mexico - CTD-FK190211-025-400m-0.65 (Metagenome Metatranscriptome)
Analysis Project Name Stem Metatranscriptome of hydrothermal vent plume microbial communities from Gulf of California, Mexico - CTD-FK190211-025-400m-0.65
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 282764
Completion Status Complete
IMG Completion Date 2022-08-25
PI Rika Anderson
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 2021-10-08 22:27:25 - MEGAHIT v1.2.9
Scaffold Count 262683
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 410452
Estimated Size 254297301
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.v5.0.25.aws
Added By JGI automated process on 2022-07-21
Last Modified By JGI automated process on 2022-08-29
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300055445
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Hydrothermal vents viral and microbial communities from various locations in Pacific Ocean
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1389745 (Portal)
ITS Analysis Project Name CTD-FK190211-025-400m-0.65-RNA metaT Annotation(v2)
ITS Analysis Product Name Metagenome Metatranscriptome
ITS Version Number 2
JGI Award DOI 10.46936/10.25585/60001283

 

 

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