ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0483845
Analysis Project Name Prefix Escherichia coli O16:H48 PG20180060
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Unicycler v. 0.4.3
IMG Decontamination
IMG Decontamination Method
Scaffold Count
Contig Count 2
Gene Calling Method (MIGS-32)
Gene Count 4598
Estimated Size 4730000
Sequencing Depth (MIGS-31.1) 94x
Annotation Pipeline
Added By JGI automated process on 2021-01-13
Last Modified By
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
Genbank Accession
Genbank ID CP043199 (GCA_008124285.1)
Release Date 2020-09-01
NCBI Genbank Version CP043199.1
Genbank ID CP043200 (GCA_008124285.1)
Release Date 2020-09-01
NCBI Genbank Version CP043200.1
Genbank Release Date 2020-09-01
ANALYSIS PROJECT COMPOSITION
Study Inflammatory infection and transmission of β-lactam resistance in a mouse model of ampicillin-induced microbiota
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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