ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0456435
Analysis Project Name Thiomicrorhabdus sp. HH1 contaminantion screened
Analysis Project Name Stem Thiomicrorhabdus sp. HH1
Analysis Project Name Suffix contaminantion screened
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 242699
Completion Status Complete
IMG Completion Date 2020-11-16
PI Kathleen Scott
Analysis Project Description Reannotation of contamination checked scaffolds
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) SPAdes v. 3.7
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 97
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2550
Estimated Size 2611632
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.20
Added By Kathleen Scott on 2020-10-31
Last Modified By JGI automated process on 2020-12-06
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2901320023
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Florida cave isolates
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1

 

 

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