ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0454189
Analysis Project Name Variovorax sp. 1763
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 243678
Completion Status Complete
IMG Completion Date 2020-11-16
PI Daniel Schachtman
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.14.1
IMG Decontamination
IMG Decontamination Method
Scaffold Count 34
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 6683
Estimated Size 6927402
Sequencing Depth (MIGS-31.1) 100x
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.5.0.20
Added By JGI automated process on 2020-09-19
Last Modified By JGI automated process on 2022-06-14
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2904449895
Genbank Accession
Genbank ID JAFICF000000000
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Sorghum-associated microbial communities from plants grown in Nebraska, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
JGI Data Utilization Status Restricted
ITS Analysis Project ID 1275669 (Portal)
ITS Analysis Project Name Variovorax sp 1763
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1
JGI Award DOI 10.46936/10.25585/60001066

 

 

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