ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0452331
Analysis Project Name Prefix Methanosarcina sp. 2.H.A.1B.4
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID
Completion Status Incomplete
IMG Completion Date
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) IDBA-UD v. 1.1.0
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 94
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 3339
Estimated Size 3907150
Sequencing Depth (MIGS-31.1) 46.0x
Annotation Pipeline
Added By JGI automated process on 2020-08-25
Last Modified By JGI automated process on 2020-08-27
Non-SP-Owner AP No
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID
Genbank Accession
Genbank ID JJOV00000000 (GCA_000979385.1)
Release Date 2020-02-06
NCBI Genbank Version JJOV01
Assembly Accession GCA_000979385.1
Genbank Release Date 2020-02-06
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Methanosarcina Genome sequencing of Methanosarcina mazei strains isolated from sediment environments in the Columbia River Estuary in Oregon, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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